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Email Contact Address: ldgh@icb.ufmg.br

Brief introduction:

This web tool facilitates population genetics studies by providing data transformation across popular data formats compatible with different population genetics software. See the Documentation for more detailed information, or try out our sample files. Developed by LDGH at ICB / UFMG. If you find this site useful, please cite us.

Before starting your analysis you should select if your dataset is haploid or diploid:
Haploid
Diploid

Steps to run the pipeline:

  1. Select if your dataset is haploid or diploid
  2. Choose the starting point acoording to the type of input file
  3. Click on "End" icon
  4. Choose the ending point according to desired output file
  5. Provide input files by clicking on "Enter"*


Start:

End:



* Privacy policy: data submited to this web tool are stored only temporarily until processing is done, and are NOT accessible to third party users.

Financial support:

This is Polyphred's output format.
This is the Prettybase format which represents SNP information for a groups of subjects over a given span of reference sequence.
This is the SDAT format representing a table with information on individuals and genotypes.
This step requires three types of input files, as follows.
1. The Phase Fragment input file.
2. The Phase Reference Sequence input file.
3. The Phase Output file.
Click on one of the images above (while the the end button is checked) to obtain more informations about the necessary output files.
This is the Prettybase format which represents SNP information for a groups of subjects over a given span of reference sequence.
This is the SDAT format representing a table with information on individuals and genotypes.
Click here to read the PHASE Software's Documentation.